Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.82□□□□□ -0.04
SMIM4Q8WVI0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SMIM4Q8WVI0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SMIM4Q8WVI0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM4Q8WVI0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 RNA5SP413-201ENST00000516373 109 ntBASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMIM4Q8WVI0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 SLC25A1P2-201ENST00000430693 912 ntBASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 PVRIG2P-201ENST00000435460 978 ntBASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM4Q8WVI0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SMIM4Q8WVI0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms