Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPS4Y2Q8TD47 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 COX11P1-201ENST00000489116 835 ntBASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 AL049597.2-201ENST00000565575 961 ntBASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 STK25P1-201ENST00000585406 838 ntBASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 AL353801.3-201ENST00000609898 542 ntBASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.15■□□□□ 0.02
RPS4Y2Q8TD47 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 HBZP1-201ENST00000354915 429 ntBASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 LINC01238-205ENST00000567549 1107 ntBASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 AC005332.3-201ENST00000589904 676 ntBASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 AL513523.2-202ENST00000427283 2040 ntBASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPS4Y2Q8TD47 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4Y2Q8TD47 AL162727.3-201ENST00000635661 2787 ntBASIC15.13■□□□□ 0.01
RPS4Y2Q8TD47 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4Y2Q8TD47 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPS4Y2Q8TD47 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms