Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 AC104109.2-201ENST00000602919 1418 ntBASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 HLA-J-201ENST00000462773 1622 ntBASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC33Q8N5R6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 BX842568.4-201ENST00000421222 227 ntBASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 OR7E14P-202ENST00000530490 1290 ntBASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 AC012640.2-201ENST00000561606 901 ntBASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC33Q8N5R6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 BX276092.7-203ENST00000637198 1536 ntBASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 AC096633.1-201ENST00000422446 749 ntBASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 IGHV3-22-201ENST00000520721 359 ntBASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC33Q8N5R6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CCDC33Q8N5R6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC33Q8N5R6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms