Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
UBR1Q8IWV7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC24.23■■□□□ 1.47
UBR1Q8IWV7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
UBR1Q8IWV7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
UBR1Q8IWV7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
UBR1Q8IWV7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC24.23■■□□□ 1.47
UBR1Q8IWV7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC24.23■■□□□ 1.47
UBR1Q8IWV7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
UBR1Q8IWV7 AC104794.3-201ENST00000566840 1248 ntBASIC24.23■■□□□ 1.47
UBR1Q8IWV7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
UBR1Q8IWV7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
UBR1Q8IWV7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
UBR1Q8IWV7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
UBR1Q8IWV7 FAM220BP-201ENST00000377689 816 ntBASIC24.21■■□□□ 1.47
UBR1Q8IWV7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 ZNF890P-202ENST00000530367 1156 ntBASIC24.21■■□□□ 1.47
UBR1Q8IWV7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 AC132938.2-201ENST00000579188 680 ntBASIC24.21■■□□□ 1.47
UBR1Q8IWV7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
UBR1Q8IWV7 AL591163.1-201ENST00000641757 987 ntBASIC24.21■■□□□ 1.47
UBR1Q8IWV7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
UBR1Q8IWV7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC24.2■■□□□ 1.47
UBR1Q8IWV7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.47
UBR1Q8IWV7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
UBR1Q8IWV7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 AC003101.2-201ENST00000612557 442 ntBASIC24.2■■□□□ 1.46
UBR1Q8IWV7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC24.2■■□□□ 1.46
UBR1Q8IWV7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 DGCR5-201ENST00000399539 862 ntBASIC24.19■■□□□ 1.46
UBR1Q8IWV7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
UBR1Q8IWV7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
UBR1Q8IWV7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
UBR1Q8IWV7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
UBR1Q8IWV7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
UBR1Q8IWV7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
UBR1Q8IWV7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC24.18■■□□□ 1.46
UBR1Q8IWV7 AC119751.2-201ENST00000504529 210 ntBASIC24.18■■□□□ 1.46
UBR1Q8IWV7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC24.18■■□□□ 1.46
UBR1Q8IWV7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC24.18■■□□□ 1.46
UBR1Q8IWV7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms