Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 OR7E14P-202ENST00000530490 1290 ntBASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 SLC25A6P4-201ENST00000586535 553 ntBASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 AL139424.1-201ENST00000607572 797 ntBASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 AC004706.3-202ENST00000621574 984 ntBASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.77■□□□□ 0.6
CBWD2Q8IUF1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBWD2Q8IUF1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CBWD2Q8IUF1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CBWD2Q8IUF1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CBWD2Q8IUF1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 LAGE3P1-201ENST00000425356 484 ntBASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 AC012640.2-201ENST00000561606 901 ntBASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 AL049840.3-201ENST00000602669 611 ntBASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 LINC02012-201ENST00000608206 1725 ntBASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.76■□□□□ 0.59
CBWD2Q8IUF1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 RNA5SP419-201ENST00000515908 135 ntBASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 FAM215A-202ENST00000632077 792 ntBASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD2Q8IUF1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 AL590787.1-201ENST00000568856 1315 ntBASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 AC006504.4-201ENST00000592118 1568 ntBASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD2Q8IUF1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms