Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 AC105020.1-201ENST00000435356 2205 ntBASIC16.01■□□□□ 0.15
VRK2Q86Y07 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 BNIP3P18-201ENST00000593976 575 ntBASIC16.01■□□□□ 0.15
VRK2Q86Y07 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 AGGF1P2-201ENST00000426656 2106 ntBASIC16.01■□□□□ 0.15
VRK2Q86Y07 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VRK2Q86Y07 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.01■□□□□ 0.15
VRK2Q86Y07 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16■□□□□ 0.15
VRK2Q86Y07 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16■□□□□ 0.15
VRK2Q86Y07 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
VRK2Q86Y07 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VRK2Q86Y07 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16■□□□□ 0.15
VRK2Q86Y07 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16■□□□□ 0.15
VRK2Q86Y07 RCN1P2-201ENST00000398357 915 ntBASIC16■□□□□ 0.15
VRK2Q86Y07 KLF4P1-201ENST00000412782 1185 ntBASIC16■□□□□ 0.15
VRK2Q86Y07 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16■□□□□ 0.15
VRK2Q86Y07 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16■□□□□ 0.15
VRK2Q86Y07 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16■□□□□ 0.15
VRK2Q86Y07 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16■□□□□ 0.15
VRK2Q86Y07 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16■□□□□ 0.15
VRK2Q86Y07 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16■□□□□ 0.15
VRK2Q86Y07 AC073592.5-201ENST00000624854 528 ntBASIC16■□□□□ 0.15
VRK2Q86Y07 AL358472.4-201ENST00000633140 710 ntBASIC16■□□□□ 0.15
VRK2Q86Y07 AP000550.4-202ENST00000639755 178 ntBASIC16■□□□□ 0.15
VRK2Q86Y07 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
VRK2Q86Y07 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16■□□□□ 0.15
VRK2Q86Y07 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16■□□□□ 0.15
VRK2Q86Y07 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16■□□□□ 0.15
VRK2Q86Y07 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
VRK2Q86Y07 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16■□□□□ 0.15
VRK2Q86Y07 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
VRK2Q86Y07 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
VRK2Q86Y07 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VRK2Q86Y07 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16■□□□□ 0.15
VRK2Q86Y07 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16■□□□□ 0.15
VRK2Q86Y07 INTS4P1-201ENST00000438455 1935 ntBASIC16■□□□□ 0.15
VRK2Q86Y07 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16■□□□□ 0.15
VRK2Q86Y07 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VRK2Q86Y07 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 AC092068.3-201ENST00000587894 2016 ntBASIC15.99■□□□□ 0.15
VRK2Q86Y07 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.99■□□□□ 0.15
VRK2Q86Y07 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 AC003669.1-201ENST00000334569 611 ntBASIC15.99■□□□□ 0.15
VRK2Q86Y07 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK2Q86Y07 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 IGHV3-47-201ENST00000425060 335 ntBASIC15.99■□□□□ 0.15
VRK2Q86Y07 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.99■□□□□ 0.15
VRK2Q86Y07 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms