Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 HLA-F-220ENST00000434407 884 ntBASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 AC012306.2-201ENST00000609350 630 ntBASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 AC011558.1-201ENST00000623459 338 ntBASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 AC133561.5-201ENST00000635547 218 ntBASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 AC008741.2-201ENST00000612792 3115 ntBASIC15.96■□□□□ 0.14
PTCHD4Q6ZW05 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.96■□□□□ 0.14
PTCHD4Q6ZW05 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTCHD4Q6ZW05 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
PTCHD4Q6ZW05 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 AC079328.2-201ENST00000561241 3354 ntBASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 AC004263.2-201ENST00000617183 678 ntBASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 AC046185.3-201ENST00000623228 1824 ntBASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.95■□□□□ 0.14
PTCHD4Q6ZW05 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 AC113347.1-201ENST00000413321 391 ntBASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 AC092597.1-201ENST00000487352 616 ntBASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 AC139887.4-201ENST00000607877 719 ntBASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 AL031432.5-201ENST00000641059 760 ntBASIC15.94■□□□□ 0.14
PTCHD4Q6ZW05 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms