Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 AC074386.1-202ENST00000463561 864 ntBASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 AC027796.2-201ENST00000575326 344 ntBASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 AC023141.13-201ENST00000604991 943 ntBASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC62Q6P9F0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 AL354751.1-201ENST00000412768 1863 ntBASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 AC007064.4-201ENST00000637740 555 ntBASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC62Q6P9F0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC62Q6P9F0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC62Q6P9F0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
CCDC62Q6P9F0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 ACTL9-202ENST00000612068 1252 ntBASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 KRT18P28-201ENST00000453838 1332 ntBASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC62Q6P9F0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 CEND1P1-201ENST00000451006 455 ntBASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 SLC25A6P2-201ENST00000497974 877 ntBASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 SNHG9-202ENST00000564014 471 ntBASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC62Q6P9F0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms