Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 KRT17P6-201ENST00000453795 1220 ntBASIC15.77■□□□□ 0.12
NIPAL3Q6P499 MINOS1P3-201ENST00000457048 203 ntBASIC15.77■□□□□ 0.12
NIPAL3Q6P499 AC104819.1-201ENST00000504587 486 ntBASIC15.77■□□□□ 0.12
NIPAL3Q6P499 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 AP005901.3-202ENST00000581653 237 ntBASIC15.77■□□□□ 0.12
NIPAL3Q6P499 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NIPAL3Q6P499 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.77■□□□□ 0.11
NIPAL3Q6P499 AC125634.1-201ENST00000438758 1403 ntBASIC15.77■□□□□ 0.11
NIPAL3Q6P499 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 AC105020.1-201ENST00000435356 2205 ntBASIC15.76■□□□□ 0.11
NIPAL3Q6P499 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 AC096633.1-201ENST00000422446 749 ntBASIC15.76■□□□□ 0.11
NIPAL3Q6P499 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 HCG4P8-203ENST00000443049 980 ntBASIC15.76■□□□□ 0.11
NIPAL3Q6P499 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 UBALD1-205ENST00000590891 2641 ntBASIC15.76■□□□□ 0.11
NIPAL3Q6P499 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.76■□□□□ 0.11
NIPAL3Q6P499 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.75■□□□□ 0.11
NIPAL3Q6P499 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms