Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 AKR1C7P-201ENST00000305623 895 ntBASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 LINC00982-205ENST00000420957 435 ntBASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 AC124947.2-201ENST00000547118 1133 ntBASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 MTDHP3-201ENST00000594186 672 ntBASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.55■□□□□ 0.88
CREB3L3Q68CJ9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 AC105020.1-201ENST00000435356 2205 ntBASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 PRYP5-201ENST00000451909 266 ntBASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 AL355877.3-201ENST00000622820 899 ntBASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 GPR89P-201ENST00000407924 1495 ntBASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3L3Q68CJ9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 FGFR3P6-201ENST00000457012 610 ntBASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 KRT18P56-201ENST00000507275 550 ntBASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 REXO1L6P-202ENST00000619970 1078 ntBASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 AL356309.3-201ENST00000624132 1934 ntBASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CREB3L3Q68CJ9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CREB3L3Q68CJ9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CREB3L3Q68CJ9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CREB3L3Q68CJ9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.52■□□□□ 0.88
CREB3L3Q68CJ9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.52■□□□□ 0.88
CREB3L3Q68CJ9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CREB3L3Q68CJ9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CREB3L3Q68CJ9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CREB3L3Q68CJ9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.52■□□□□ 0.88
CREB3L3Q68CJ9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CREB3L3Q68CJ9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms