Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC099336.1-201ENST00000417053 1171 ntBASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 CALR4P-201ENST00000431943 946 ntBASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 RPS2P36-201ENST00000456516 831 ntBASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 RARRES2P9-201ENST00000565168 469 ntBASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRPF38BQ5VTL8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 AC007551.1-201ENST00000457394 519 ntBASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 BTNL10-201ENST00000595971 695 ntBASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 SPCS2P2-201ENST00000603270 608 ntBASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.57■□□□□ 0.56
PRPF38BQ5VTL8 AL035456.1-201ENST00000456064 1369 ntBASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 AC009336.1-201ENST00000608941 1553 ntBASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 ELK1P1-201ENST00000485699 580 ntBASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 AC109635.5-201ENST00000533593 962 ntBASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 CTBP2P3-201ENST00000585629 1255 ntBASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 MIR7845-201ENST00000618396 99 ntBASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 PCDHAC2-203ENST00000615316 3011 ntBASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PRPF38BQ5VTL8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRPF38BQ5VTL8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms