Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PIN1P1-201ENST00000412108 996 ntBASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 AC022494.1-201ENST00000466044 728 ntBASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 AC116407.2-201ENST00000613639 860 ntBASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 AC009113.1-201ENST00000570267 2443 ntBASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 LINC00896-202ENST00000609602 2128 ntBASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 AC022144.1-201ENST00000602255 1580 ntBASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 AC140878.1-201ENST00000565277 250 ntBASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 TEX28P1-201ENST00000613479 1221 ntBASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 MIR6080-201ENST00000617359 66 ntBASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 TEX28P2-201ENST00000617764 1221 ntBASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 AC012569.1-201ENST00000591191 1524 ntBASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
VPS13DQ5THJ4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 AC079776.1-201ENST00000401540 1152 ntBASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 CR383656.12-201ENST00000549567 513 ntBASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 AL606495.2-201ENST00000605867 535 ntBASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 AL662799.1-202ENST00000614205 422 ntBASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC11.46□□□□□ -0.57
VPS13DQ5THJ4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 MIR4453-201ENST00000584019 89 ntBASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 AC004840.1-201ENST00000636359 365 ntBASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13DQ5THJ4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13DQ5THJ4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13DQ5THJ4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
VPS13DQ5THJ4 HCG4-201ENST00000418983 998 ntBASIC11.45□□□□□ -0.58
VPS13DQ5THJ4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.45□□□□□ -0.58
VPS13DQ5THJ4 AC027307.2-201ENST00000591252 911 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms