Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 AC079602.3-201ENST00000623931 403 ntBASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 ANKRD20A8P-203ENST00000641373 517 ntBASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 KRT17P2-201ENST00000300992 1314 ntBASIC11.85□□□□□ -0.51
LINC00242Q5T6M2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 COX5BP2-201ENST00000392354 334 ntBASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 RASA4DP-201ENST00000460726 1199 ntBASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00242Q5T6M2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms