Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ASIC1P78348 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.32■□□□□ 0.68
ASIC1P78348 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.32■□□□□ 0.68
ASIC1P78348 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.32■□□□□ 0.68
ASIC1P78348 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.32■□□□□ 0.68
ASIC1P78348 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.32■□□□□ 0.68
ASIC1P78348 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.32■□□□□ 0.68
ASIC1P78348 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.32■□□□□ 0.68
ASIC1P78348 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.32■□□□□ 0.68
ASIC1P78348 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.32■□□□□ 0.68
ASIC1P78348 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ASIC1P78348 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ASIC1P78348 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ASIC1P78348 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.32■□□□□ 0.68
ASIC1P78348 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ASIC1P78348 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.32■□□□□ 0.68
ASIC1P78348 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.32■□□□□ 0.68
ASIC1P78348 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ASIC1P78348 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.32■□□□□ 0.68
ASIC1P78348 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ASIC1P78348 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ASIC1P78348 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
ASIC1P78348 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ASIC1P78348 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.31■□□□□ 0.68
ASIC1P78348 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.31■□□□□ 0.68
ASIC1P78348 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
ASIC1P78348 FOSL1P1-201ENST00000511041 816 ntBASIC19.31■□□□□ 0.68
ASIC1P78348 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.31■□□□□ 0.68
ASIC1P78348 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.31■□□□□ 0.68
ASIC1P78348 AL591684.3-201ENST00000605187 298 ntBASIC19.31■□□□□ 0.68
ASIC1P78348 AP000867.4-201ENST00000641616 219 ntBASIC19.31■□□□□ 0.68
ASIC1P78348 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ASIC1P78348 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ASIC1P78348 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
ASIC1P78348 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.31■□□□□ 0.68
ASIC1P78348 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ASIC1P78348 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ASIC1P78348 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.3■□□□□ 0.68
ASIC1P78348 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.3■□□□□ 0.68
ASIC1P78348 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.3■□□□□ 0.68
ASIC1P78348 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.3■□□□□ 0.68
ASIC1P78348 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ASIC1P78348 AL121761.2-201ENST00000598007 1648 ntBASIC19.3■□□□□ 0.68
ASIC1P78348 AC148477.5-201ENST00000625164 1645 ntBASIC19.3■□□□□ 0.68
ASIC1P78348 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.3■□□□□ 0.68
ASIC1P78348 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.3■□□□□ 0.68
ASIC1P78348 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.3■□□□□ 0.68
ASIC1P78348 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.3■□□□□ 0.68
ASIC1P78348 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ASIC1P78348 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ASIC1P78348 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.3■□□□□ 0.68
ASIC1P78348 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ASIC1P78348 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ASIC1P78348 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ASIC1P78348 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ASIC1P78348 AC092053.1-201ENST00000605787 1936 ntBASIC19.29■□□□□ 0.68
ASIC1P78348 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ASIC1P78348 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ASIC1P78348 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ASIC1P78348 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.29■□□□□ 0.68
ASIC1P78348 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ASIC1P78348 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.29■□□□□ 0.68
ASIC1P78348 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ASIC1P78348 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.29■□□□□ 0.68
ASIC1P78348 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms