Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CXCR4P61073 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCR4P61073 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CXCR4P61073 CYP2D8P-201ENST00000433633 1490 ntBASIC15.79■□□□□ 0.12
CXCR4P61073 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCR4P61073 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
CXCR4P61073 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCR4P61073 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCR4P61073 SNORA78-201ENST00000459373 127 ntBASIC15.79■□□□□ 0.12
CXCR4P61073 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.79■□□□□ 0.12
CXCR4P61073 AC002558.1-201ENST00000488906 803 ntBASIC15.79■□□□□ 0.12
CXCR4P61073 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCR4P61073 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CXCR4P61073 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.79■□□□□ 0.12
CXCR4P61073 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.79■□□□□ 0.12
CXCR4P61073 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CXCR4P61073 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CXCR4P61073 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.79■□□□□ 0.12
CXCR4P61073 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.79■□□□□ 0.12
CXCR4P61073 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.79■□□□□ 0.12
CXCR4P61073 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CXCR4P61073 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CXCR4P61073 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.78■□□□□ 0.12
CXCR4P61073 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.78■□□□□ 0.12
CXCR4P61073 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.78■□□□□ 0.12
CXCR4P61073 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.78■□□□□ 0.12
CXCR4P61073 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 AC024909.3-201ENST00000611513 2257 ntBASIC15.78■□□□□ 0.12
CXCR4P61073 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CXCR4P61073 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CXCR4P61073 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.78■□□□□ 0.12
CXCR4P61073 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.78■□□□□ 0.12
CXCR4P61073 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.78■□□□□ 0.12
CXCR4P61073 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.78■□□□□ 0.12
CXCR4P61073 NAPSB-206ENST00000562112 1266 ntBASIC15.78■□□□□ 0.12
CXCR4P61073 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.78■□□□□ 0.12
CXCR4P61073 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.78■□□□□ 0.12
CXCR4P61073 AL157888.1-201ENST00000631930 593 ntBASIC15.78■□□□□ 0.12
CXCR4P61073 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.78■□□□□ 0.12
CXCR4P61073 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CXCR4P61073 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CXCR4P61073 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.78■□□□□ 0.12
CXCR4P61073 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.78■□□□□ 0.12
CXCR4P61073 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.78■□□□□ 0.12
CXCR4P61073 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.78■□□□□ 0.12
CXCR4P61073 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CXCR4P61073 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.78■□□□□ 0.12
CXCR4P61073 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CXCR4P61073 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CXCR4P61073 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
CXCR4P61073 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CXCR4P61073 AC132872.4-202ENST00000622924 2756 ntBASIC15.77■□□□□ 0.12
CXCR4P61073 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CXCR4P61073 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.77■□□□□ 0.12
CXCR4P61073 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CXCR4P61073 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CXCR4P61073 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.77■□□□□ 0.12
CXCR4P61073 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CXCR4P61073 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms