Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH13P55290 RNF216P1-203ENST00000404404 2427 ntBASIC16.95■□□□□ 0.3
CDH13P55290 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH13P55290 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDH13P55290 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDH13P55290 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDH13P55290 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH13P55290 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH13P55290 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDH13P55290 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH13P55290 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH13P55290 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH13P55290 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH13P55290 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CDH13P55290 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDH13P55290 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH13P55290 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.94■□□□□ 0.3
CDH13P55290 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH13P55290 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH13P55290 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 FAM220CP-201ENST00000395253 831 ntBASIC16.93■□□□□ 0.3
CDH13P55290 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
CDH13P55290 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH13P55290 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH13P55290 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH13P55290 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH13P55290 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH13P55290 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH13P55290 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH13P55290 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CDH13P55290 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDH13P55290 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDH13P55290 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH13P55290 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH13P55290 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH13P55290 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH13P55290 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDH13P55290 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH13P55290 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH13P55290 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDH13P55290 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH13P55290 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH13P55290 AC103564.2-201ENST00000432853 1299 ntBASIC16.92■□□□□ 0.3
CDH13P55290 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH13P55290 AC111152.3-201ENST00000569699 673 ntBASIC16.92■□□□□ 0.3
CDH13P55290 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH13P55290 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDH13P55290 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH13P55290 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDH13P55290 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH13P55290 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH13P55290 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CDH13P55290 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms