Protein–RNA interactions for Protein: P50461

CSRP3, Cysteine and glycine-rich protein 3, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP3P50461 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.11■□□□□ 0.33
CSRP3P50461 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CSRP3P50461 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.11■□□□□ 0.33
CSRP3P50461 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSRP3P50461 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSRP3P50461 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.11■□□□□ 0.33
CSRP3P50461 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.11■□□□□ 0.33
CSRP3P50461 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.11■□□□□ 0.33
CSRP3P50461 TOB2P1-201ENST00000469761 992 ntBASIC17.11■□□□□ 0.33
CSRP3P50461 AC104819.1-201ENST00000504587 486 ntBASIC17.11■□□□□ 0.33
CSRP3P50461 RNPS1P1-201ENST00000507437 918 ntBASIC17.11■□□□□ 0.33
CSRP3P50461 AC027796.2-201ENST00000575326 344 ntBASIC17.11■□□□□ 0.33
CSRP3P50461 AC140113.2-201ENST00000604370 208 ntBASIC17.11■□□□□ 0.33
CSRP3P50461 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.11■□□□□ 0.33
CSRP3P50461 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSRP3P50461 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.11■□□□□ 0.33
CSRP3P50461 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSRP3P50461 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.11■□□□□ 0.33
CSRP3P50461 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSRP3P50461 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSRP3P50461 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.11■□□□□ 0.33
CSRP3P50461 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSRP3P50461 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSRP3P50461 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSRP3P50461 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSRP3P50461 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.1■□□□□ 0.33
CSRP3P50461 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
CSRP3P50461 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CSRP3P50461 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CSRP3P50461 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CSRP3P50461 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CSRP3P50461 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.1■□□□□ 0.33
CSRP3P50461 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.1■□□□□ 0.33
CSRP3P50461 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.1■□□□□ 0.33
CSRP3P50461 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.1■□□□□ 0.33
CSRP3P50461 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.1■□□□□ 0.33
CSRP3P50461 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 UBALD1-205ENST00000590891 2641 ntBASIC17.1■□□□□ 0.33
CSRP3P50461 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.1■□□□□ 0.33
CSRP3P50461 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CSRP3P50461 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSRP3P50461 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSRP3P50461 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSRP3P50461 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CSRP3P50461 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CSRP3P50461 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CSRP3P50461 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSRP3P50461 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
CSRP3P50461 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSRP3P50461 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSRP3P50461 AC003669.1-201ENST00000334569 611 ntBASIC17.09■□□□□ 0.33
CSRP3P50461 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.09■□□□□ 0.33
CSRP3P50461 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CSRP3P50461 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.09■□□□□ 0.33
CSRP3P50461 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.09■□□□□ 0.33
CSRP3P50461 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.09■□□□□ 0.33
CSRP3P50461 DUX4L17-201ENST00000557360 1267 ntBASIC17.09■□□□□ 0.33
CSRP3P50461 AC106730.1-201ENST00000566722 1090 ntBASIC17.09■□□□□ 0.33
CSRP3P50461 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.09■□□□□ 0.33
CSRP3P50461 AL773604.1-201ENST00000617417 272 ntBASIC17.09■□□□□ 0.33
CSRP3P50461 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.09■□□□□ 0.33
CSRP3P50461 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.09■□□□□ 0.33
CSRP3P50461 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.09■□□□□ 0.33
CSRP3P50461 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CSRP3P50461 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSRP3P50461 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSRP3P50461 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.09■□□□□ 0.33
CSRP3P50461 AL603756.1-201ENST00000606511 2163 ntBASIC17.09■□□□□ 0.33
CSRP3P50461 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSRP3P50461 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CSRP3P50461 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.08■□□□□ 0.33
CSRP3P50461 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms