Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
CSNK1A1P48729 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSNK1A1P48729 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.42■□□□□ 0.06
CSNK1A1P48729 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CSNK1A1P48729 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1A1P48729 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1A1P48729 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1A1P48729 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1A1P48729 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1A1P48729 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1A1P48729 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1A1P48729 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1A1P48729 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 SIGLEC30P-201ENST00000455569 941 ntBASIC15.41■□□□□ 0.06
CSNK1A1P48729 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 LINC01711-201ENST00000598340 967 ntBASIC15.41■□□□□ 0.06
CSNK1A1P48729 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1A1P48729 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1A1P48729 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.41■□□□□ 0.06
CSNK1A1P48729 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CSNK1A1P48729 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 SPDYE21P-201ENST00000413323 827 ntBASIC15.4■□□□□ 0.06
CSNK1A1P48729 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 KRT18P56-201ENST00000507275 550 ntBASIC15.4■□□□□ 0.06
CSNK1A1P48729 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 PRORSD1P-202ENST00000563365 2154 ntBASIC15.4■□□□□ 0.06
CSNK1A1P48729 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 AC116353.5-201ENST00000638148 1699 ntBASIC15.4■□□□□ 0.06
CSNK1A1P48729 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.4■□□□□ 0.06
CSNK1A1P48729 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CSNK1A1P48729 AC012313.1-201ENST00000593393 3059 ntBASIC15.4■□□□□ 0.06
CSNK1A1P48729 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.06
CSNK1A1P48729 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.06
CSNK1A1P48729 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.06
CSNK1A1P48729 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.39■□□□□ 0.06
CSNK1A1P48729 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1A1P48729 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.39■□□□□ 0.05
CSNK1A1P48729 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CSNK1A1P48729 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1A1P48729 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1A1P48729 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.39■□□□□ 0.05
CSNK1A1P48729 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1A1P48729 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CSNK1A1P48729 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CSNK1A1P48729 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CSNK1A1P48729 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1A1P48729 AL135999.2-201ENST00000622438 1686 ntBASIC15.39■□□□□ 0.05
CSNK1A1P48729 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1A1P48729 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1A1P48729 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CSNK1A1P48729 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CSNK1A1P48729 TSPY19P-201ENST00000418461 509 ntBASIC15.39■□□□□ 0.05
CSNK1A1P48729 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CSNK1A1P48729 TSPY18P-201ENST00000441642 509 ntBASIC15.39■□□□□ 0.05
CSNK1A1P48729 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CSNK1A1P48729 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.39■□□□□ 0.05
CSNK1A1P48729 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms