Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
GDF5P43026 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.86■□□□□ 0.29
GDF5P43026 AC148477.5-201ENST00000625164 1645 ntBASIC16.86■□□□□ 0.29
GDF5P43026 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.86■□□□□ 0.29
GDF5P43026 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 AC003669.1-201ENST00000334569 611 ntBASIC16.86■□□□□ 0.29
GDF5P43026 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
GDF5P43026 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
GDF5P43026 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.86■□□□□ 0.29
GDF5P43026 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
GDF5P43026 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
GDF5P43026 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
GDF5P43026 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
GDF5P43026 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
GDF5P43026 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.86■□□□□ 0.29
GDF5P43026 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 AC106886.4-201ENST00000623557 2502 ntBASIC16.86■□□□□ 0.29
GDF5P43026 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF5P43026 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.85■□□□□ 0.29
GDF5P43026 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
GDF5P43026 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GDF5P43026 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
GDF5P43026 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
GDF5P43026 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GDF5P43026 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
GDF5P43026 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
GDF5P43026 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.85■□□□□ 0.29
GDF5P43026 FOSL1P1-201ENST00000511041 816 ntBASIC16.85■□□□□ 0.29
GDF5P43026 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.85■□□□□ 0.29
GDF5P43026 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.85■□□□□ 0.29
GDF5P43026 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.85■□□□□ 0.29
GDF5P43026 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.85■□□□□ 0.29
GDF5P43026 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.85■□□□□ 0.29
GDF5P43026 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.85■□□□□ 0.29
GDF5P43026 AP000867.4-201ENST00000641616 219 ntBASIC16.85■□□□□ 0.29
GDF5P43026 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
GDF5P43026 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GDF5P43026 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.85■□□□□ 0.29
GDF5P43026 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.85■□□□□ 0.29
GDF5P43026 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.85■□□□□ 0.29
GDF5P43026 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
GDF5P43026 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF5P43026 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
GDF5P43026 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
GDF5P43026 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.84■□□□□ 0.29
GDF5P43026 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GDF5P43026 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.84■□□□□ 0.29
GDF5P43026 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.84■□□□□ 0.29
GDF5P43026 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.84■□□□□ 0.29
GDF5P43026 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.84■□□□□ 0.29
GDF5P43026 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
GDF5P43026 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.84■□□□□ 0.29
GDF5P43026 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GDF5P43026 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.84■□□□□ 0.29
GDF5P43026 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.84■□□□□ 0.29
GDF5P43026 AL591684.3-201ENST00000605187 298 ntBASIC16.84■□□□□ 0.29
GDF5P43026 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.84■□□□□ 0.29
GDF5P43026 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.84■□□□□ 0.29
GDF5P43026 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
GDF5P43026 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
GDF5P43026 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF5P43026 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms