Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SNCAP37840 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SNCAP37840 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SNCAP37840 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 AC006449.5-201ENST00000610658 2098 ntBASIC14.29□□□□□ -0.12
SNCAP37840 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 AP000523.1-201ENST00000398242 1049 ntBASIC14.29□□□□□ -0.12
SNCAP37840 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 AC009947.2-201ENST00000444014 672 ntBASIC14.29□□□□□ -0.12
SNCAP37840 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.29□□□□□ -0.12
SNCAP37840 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.29□□□□□ -0.12
SNCAP37840 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.29□□□□□ -0.12
SNCAP37840 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.29□□□□□ -0.12
SNCAP37840 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.29□□□□□ -0.12
SNCAP37840 NAPSB-206ENST00000562112 1266 ntBASIC14.29□□□□□ -0.12
SNCAP37840 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.29□□□□□ -0.12
SNCAP37840 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.29□□□□□ -0.12
SNCAP37840 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.29□□□□□ -0.12
SNCAP37840 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 AC132872.4-202ENST00000622924 2756 ntBASIC14.29□□□□□ -0.12
SNCAP37840 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.29□□□□□ -0.12
SNCAP37840 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SNCAP37840 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.29□□□□□ -0.12
SNCAP37840 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SNCAP37840 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.29□□□□□ -0.12
SNCAP37840 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SNCAP37840 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.29□□□□□ -0.12
SNCAP37840 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNCAP37840 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SNCAP37840 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SNCAP37840 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.28□□□□□ -0.12
SNCAP37840 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SNCAP37840 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SNCAP37840 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.28□□□□□ -0.12
SNCAP37840 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.28□□□□□ -0.12
SNCAP37840 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.28□□□□□ -0.12
SNCAP37840 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.28□□□□□ -0.12
SNCAP37840 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.28□□□□□ -0.12
SNCAP37840 SEC1P-202ENST00000473944 940 ntBASIC14.28□□□□□ -0.12
SNCAP37840 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.28□□□□□ -0.12
SNCAP37840 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.28□□□□□ -0.12
SNCAP37840 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.28□□□□□ -0.12
SNCAP37840 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.28□□□□□ -0.12
SNCAP37840 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.28□□□□□ -0.12
SNCAP37840 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.28□□□□□ -0.12
SNCAP37840 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.28□□□□□ -0.12
SNCAP37840 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
SNCAP37840 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SNCAP37840 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
SNCAP37840 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.28□□□□□ -0.12
SNCAP37840 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNCAP37840 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.27□□□□□ -0.12
SNCAP37840 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SNCAP37840 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.27□□□□□ -0.12
SNCAP37840 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.27□□□□□ -0.12
SNCAP37840 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.27□□□□□ -0.12
SNCAP37840 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SNCAP37840 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms