Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 AC243591.1-201ENST00000452967 1364 ntBASIC17.95■□□□□ 0.46
SCNN1AP37088 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 AC136632.2-201ENST00000512891 861 ntBASIC17.95■□□□□ 0.46
SCNN1AP37088 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.95■□□□□ 0.46
SCNN1AP37088 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.95■□□□□ 0.46
SCNN1AP37088 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.95■□□□□ 0.46
SCNN1AP37088 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.95■□□□□ 0.46
SCNN1AP37088 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.95■□□□□ 0.46
SCNN1AP37088 AC105339.3-201ENST00000560043 636 ntBASIC17.95■□□□□ 0.46
SCNN1AP37088 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.95■□□□□ 0.46
SCNN1AP37088 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.95■□□□□ 0.46
SCNN1AP37088 AC006504.4-201ENST00000592118 1568 ntBASIC17.95■□□□□ 0.46
SCNN1AP37088 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.95■□□□□ 0.46
SCNN1AP37088 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.95■□□□□ 0.46
SCNN1AP37088 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.95■□□□□ 0.46
SCNN1AP37088 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCNN1AP37088 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.94■□□□□ 0.46
SCNN1AP37088 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.94■□□□□ 0.46
SCNN1AP37088 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.94■□□□□ 0.46
SCNN1AP37088 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCNN1AP37088 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 AL662844.1-201ENST00000546340 181 ntBASIC17.94■□□□□ 0.46
SCNN1AP37088 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.94■□□□□ 0.46
SCNN1AP37088 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.94■□□□□ 0.46
SCNN1AP37088 FAM215A-202ENST00000632077 792 ntBASIC17.94■□□□□ 0.46
SCNN1AP37088 PGM5P2-202ENST00000637225 1043 ntBASIC17.94■□□□□ 0.46
SCNN1AP37088 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.94■□□□□ 0.46
SCNN1AP37088 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.94■□□□□ 0.46
SCNN1AP37088 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.94■□□□□ 0.46
SCNN1AP37088 AC060834.1-201ENST00000443027 2032 ntBASIC17.94■□□□□ 0.46
SCNN1AP37088 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.94■□□□□ 0.46
SCNN1AP37088 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.94■□□□□ 0.46
SCNN1AP37088 TUBB8P12-201ENST00000308911 1335 ntBASIC17.94■□□□□ 0.46
SCNN1AP37088 TUBB7P-202ENST00000428444 1305 ntBASIC17.94■□□□□ 0.46
SCNN1AP37088 TUBB8P7-204ENST00000567960 1332 ntBASIC17.94■□□□□ 0.46
SCNN1AP37088 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.94■□□□□ 0.46
SCNN1AP37088 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCNN1AP37088 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.93■□□□□ 0.46
SCNN1AP37088 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SCNN1AP37088 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SCNN1AP37088 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.93■□□□□ 0.46
SCNN1AP37088 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.93■□□□□ 0.46
SCNN1AP37088 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.93■□□□□ 0.46
SCNN1AP37088 PTCHD3P3-201ENST00000403073 906 ntBASIC17.93■□□□□ 0.46
SCNN1AP37088 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.93■□□□□ 0.46
SCNN1AP37088 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.93■□□□□ 0.46
SCNN1AP37088 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.93■□□□□ 0.46
SCNN1AP37088 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SCNN1AP37088 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SCNN1AP37088 AC148477.8-201ENST00000624298 468 ntBASIC17.93■□□□□ 0.46
SCNN1AP37088 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SCNN1AP37088 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.93■□□□□ 0.46
SCNN1AP37088 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCNN1AP37088 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.93■□□□□ 0.46
SCNN1AP37088 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SCNN1AP37088 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.92■□□□□ 0.46
SCNN1AP37088 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCNN1AP37088 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.92■□□□□ 0.46
SCNN1AP37088 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.92■□□□□ 0.46
SCNN1AP37088 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SCNN1AP37088 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.92■□□□□ 0.46
SCNN1AP37088 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.92■□□□□ 0.46
SCNN1AP37088 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SCNN1AP37088 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCNN1AP37088 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.92■□□□□ 0.46
SCNN1AP37088 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCNN1AP37088 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCNN1AP37088 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms