Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMLP26374 LINC00982-205ENST00000420957 435 ntBASIC20.84■□□□□ 0.93
CHMLP26374 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.84■□□□□ 0.93
CHMLP26374 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.84■□□□□ 0.93
CHMLP26374 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.84■□□□□ 0.93
CHMLP26374 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMLP26374 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMLP26374 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMLP26374 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMLP26374 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHMLP26374 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMLP26374 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMLP26374 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CHMLP26374 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMLP26374 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMLP26374 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMLP26374 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMLP26374 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMLP26374 FLJ38576-201ENST00000623820 2459 ntBASIC20.83■□□□□ 0.93
CHMLP26374 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.83■□□□□ 0.93
CHMLP26374 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMLP26374 RNF216P1-203ENST00000404404 2427 ntBASIC20.83■□□□□ 0.93
CHMLP26374 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMLP26374 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMLP26374 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMLP26374 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMLP26374 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
CHMLP26374 PRYP5-201ENST00000451909 266 ntBASIC20.83■□□□□ 0.93
CHMLP26374 BX005266.1-201ENST00000473402 457 ntBASIC20.83■□□□□ 0.93
CHMLP26374 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.83■□□□□ 0.93
CHMLP26374 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CHMLP26374 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CHMLP26374 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.83■□□□□ 0.93
CHMLP26374 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.83■□□□□ 0.93
CHMLP26374 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMLP26374 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHMLP26374 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHMLP26374 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CHMLP26374 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CHMLP26374 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.83■□□□□ 0.92
CHMLP26374 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMLP26374 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMLP26374 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMLP26374 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CHMLP26374 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.83■□□□□ 0.92
CHMLP26374 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.83■□□□□ 0.92
CHMLP26374 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMLP26374 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHMLP26374 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.83■□□□□ 0.92
CHMLP26374 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMLP26374 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.82■□□□□ 0.92
CHMLP26374 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CHMLP26374 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.82■□□□□ 0.92
CHMLP26374 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CHMLP26374 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.82■□□□□ 0.92
CHMLP26374 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMLP26374 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.82■□□□□ 0.92
CHMLP26374 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.82■□□□□ 0.92
CHMLP26374 NKAPP1-205ENST00000585790 367 ntBASIC20.82■□□□□ 0.92
CHMLP26374 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.82■□□□□ 0.92
CHMLP26374 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CHMLP26374 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.82■□□□□ 0.92
CHMLP26374 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMLP26374 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMLP26374 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMLP26374 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMLP26374 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMLP26374 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMLP26374 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMLP26374 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMLP26374 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CHMLP26374 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMLP26374 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CHMLP26374 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMLP26374 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMLP26374 RBM17P3-201ENST00000417687 1192 ntBASIC20.81■□□□□ 0.92
CHMLP26374 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.81■□□□□ 0.92
CHMLP26374 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.81■□□□□ 0.92
CHMLP26374 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMLP26374 AL121772.3-201ENST00000610840 674 ntBASIC20.81■□□□□ 0.92
CHMLP26374 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMLP26374 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms