Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.08■□□□□ 0.16
PRKCAP17252 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRKCAP17252 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.08■□□□□ 0.16
PRKCAP17252 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.08■□□□□ 0.16
PRKCAP17252 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PRKCAP17252 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PRKCAP17252 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRKCAP17252 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRKCAP17252 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKCAP17252 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.08■□□□□ 0.16
PRKCAP17252 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKCAP17252 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRKCAP17252 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKCAP17252 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PRKCAP17252 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PRKCAP17252 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKCAP17252 NSUN5P1-202ENST00000421140 1535 ntBASIC16.08■□□□□ 0.16
PRKCAP17252 NSUN5P2-203ENST00000457352 1529 ntBASIC16.08■□□□□ 0.16
PRKCAP17252 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PRKCAP17252 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.08■□□□□ 0.16
PRKCAP17252 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKCAP17252 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRKCAP17252 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRKCAP17252 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.08■□□□□ 0.16
PRKCAP17252 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.08■□□□□ 0.16
PRKCAP17252 REXO1L11P-201ENST00000620964 1927 ntBASIC16.07■□□□□ 0.16
PRKCAP17252 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRKCAP17252 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PRKCAP17252 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRKCAP17252 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 AL355312.1-201ENST00000407115 2176 ntBASIC16.07■□□□□ 0.16
PRKCAP17252 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.07■□□□□ 0.16
PRKCAP17252 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PRKCAP17252 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRKCAP17252 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.07■□□□□ 0.16
PRKCAP17252 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.07■□□□□ 0.16
PRKCAP17252 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 HCG4P8-203ENST00000443049 980 ntBASIC16.07■□□□□ 0.16
PRKCAP17252 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.07■□□□□ 0.16
PRKCAP17252 MINOS1P3-201ENST00000457048 203 ntBASIC16.07■□□□□ 0.16
PRKCAP17252 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PRKCAP17252 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.07■□□□□ 0.16
PRKCAP17252 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.07■□□□□ 0.16
PRKCAP17252 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.07■□□□□ 0.16
PRKCAP17252 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.07■□□□□ 0.16
PRKCAP17252 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.07■□□□□ 0.16
PRKCAP17252 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.07■□□□□ 0.16
PRKCAP17252 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.07■□□□□ 0.16
PRKCAP17252 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.07■□□□□ 0.16
PRKCAP17252 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.07■□□□□ 0.16
PRKCAP17252 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.07■□□□□ 0.16
PRKCAP17252 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.07■□□□□ 0.16
PRKCAP17252 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PRKCAP17252 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.07■□□□□ 0.16
PRKCAP17252 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRKCAP17252 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PRKCAP17252 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.06■□□□□ 0.16
PRKCAP17252 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PRKCAP17252 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PRKCAP17252 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.06■□□□□ 0.16
PRKCAP17252 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.06■□□□□ 0.16
PRKCAP17252 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.06■□□□□ 0.16
PRKCAP17252 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PRKCAP17252 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.06■□□□□ 0.16
PRKCAP17252 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.06■□□□□ 0.16
PRKCAP17252 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.06■□□□□ 0.16
PRKCAP17252 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PRKCAP17252 COX5BP2-201ENST00000392354 334 ntBASIC16.06■□□□□ 0.16
PRKCAP17252 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms