Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.41■□□□□ 0.22
LAMP1P11279 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.41■□□□□ 0.22
LAMP1P11279 AD001527.2-201ENST00000622994 785 ntBASIC16.41■□□□□ 0.22
LAMP1P11279 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.41■□□□□ 0.22
LAMP1P11279 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LAMP1P11279 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LAMP1P11279 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LAMP1P11279 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LAMP1P11279 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LAMP1P11279 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LAMP1P11279 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
LAMP1P11279 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LAMP1P11279 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.41■□□□□ 0.22
LAMP1P11279 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LAMP1P11279 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.41■□□□□ 0.22
LAMP1P11279 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LAMP1P11279 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
LAMP1P11279 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.4■□□□□ 0.22
LAMP1P11279 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.4■□□□□ 0.22
LAMP1P11279 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
LAMP1P11279 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.4■□□□□ 0.22
LAMP1P11279 UBALD1-205ENST00000590891 2641 ntBASIC16.4■□□□□ 0.22
LAMP1P11279 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.4■□□□□ 0.22
LAMP1P11279 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 EGFEM1P-202ENST00000431685 1563 ntBASIC16.4■□□□□ 0.22
LAMP1P11279 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LAMP1P11279 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.4■□□□□ 0.22
LAMP1P11279 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 PCED1CP-201ENST00000419887 785 ntBASIC16.4■□□□□ 0.22
LAMP1P11279 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.4■□□□□ 0.22
LAMP1P11279 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.4■□□□□ 0.22
LAMP1P11279 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LAMP1P11279 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 PCDHA14-201ENST00000506751 2298 ntBASIC16.4■□□□□ 0.22
LAMP1P11279 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.4■□□□□ 0.22
LAMP1P11279 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LAMP1P11279 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
LAMP1P11279 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LAMP1P11279 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
LAMP1P11279 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.39■□□□□ 0.22
LAMP1P11279 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LAMP1P11279 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LAMP1P11279 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LAMP1P11279 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 RNF216P1-203ENST00000404404 2427 ntBASIC16.39■□□□□ 0.21
LAMP1P11279 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LAMP1P11279 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMP1P11279 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMP1P11279 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMP1P11279 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.39■□□□□ 0.21
LAMP1P11279 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.39■□□□□ 0.21
LAMP1P11279 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.39■□□□□ 0.21
LAMP1P11279 DRAXINP1-201ENST00000437611 948 ntBASIC16.39■□□□□ 0.21
LAMP1P11279 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMP1P11279 FAM210CP-201ENST00000445714 574 ntBASIC16.39■□□□□ 0.21
LAMP1P11279 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.39■□□□□ 0.21
LAMP1P11279 TPSP2-201ENST00000561760 610 ntBASIC16.39■□□□□ 0.21
LAMP1P11279 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.39■□□□□ 0.21
LAMP1P11279 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.39■□□□□ 0.21
LAMP1P11279 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.39■□□□□ 0.21
LAMP1P11279 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LAMP1P11279 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.39■□□□□ 0.21
LAMP1P11279 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LAMP1P11279 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LAMP1P11279 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
LAMP1P11279 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LAMP1P11279 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
LAMP1P11279 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LAMP1P11279 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LAMP1P11279 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.38■□□□□ 0.21
LAMP1P11279 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms