Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPRFP10586 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPRFP10586 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 MIR943-201ENST00000401286 94 ntBASIC19.62■□□□□ 0.73
PTPRFP10586 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPRFP10586 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PTPRFP10586 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 AC027307.2-201ENST00000591252 911 ntBASIC19.62■□□□□ 0.73
PTPRFP10586 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPRFP10586 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 AC131009.4-201ENST00000624048 1740 ntBASIC19.62■□□□□ 0.73
PTPRFP10586 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPRFP10586 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PTPRFP10586 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPRFP10586 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PTPRFP10586 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPRFP10586 HLA-J-202ENST00000469281 1241 ntBASIC19.61■□□□□ 0.73
PTPRFP10586 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPRFP10586 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PTPRFP10586 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPRFP10586 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PTPRFP10586 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
PTPRFP10586 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.61■□□□□ 0.73
PTPRFP10586 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPRFP10586 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPRFP10586 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPRFP10586 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPRFP10586 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPRFP10586 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPRFP10586 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPRFP10586 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PTPRFP10586 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPRFP10586 AC004408.2-201ENST00000623613 2777 ntBASIC19.6■□□□□ 0.73
PTPRFP10586 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PTPRFP10586 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPRFP10586 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PTPRFP10586 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PTPRFP10586 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPRFP10586 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPRFP10586 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPRFP10586 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPRFP10586 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPRFP10586 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPRFP10586 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPRFP10586 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PTPRFP10586 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPRFP10586 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTPRFP10586 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPRFP10586 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPRFP10586 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PTPRFP10586 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPRFP10586 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPRFP10586 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PTPRFP10586 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPRFP10586 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPRFP10586 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPRFP10586 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPRFP10586 AC016027.1-202ENST00000607927 1699 ntBASIC19.59■□□□□ 0.73
PTPRFP10586 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.59■□□□□ 0.73
PTPRFP10586 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
PTPRFP10586 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PTPRFP10586 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
PTPRFP10586 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPRFP10586 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPRFP10586 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPRFP10586 AL354751.1-201ENST00000412768 1863 ntBASIC19.59■□□□□ 0.73
PTPRFP10586 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PTPRFP10586 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPRFP10586 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPRFP10586 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPRFP10586 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.59■□□□□ 0.73
PTPRFP10586 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPRFP10586 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.59■□□□□ 0.73
PTPRFP10586 AC091167.2-201ENST00000579581 588 ntBASIC19.59■□□□□ 0.73
PTPRFP10586 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPRFP10586 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPRFP10586 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PTPRFP10586 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms