Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.93■□□□□ 0.46
CD48P09326 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 NUS1P1-201ENST00000446295 882 ntBASIC17.93■□□□□ 0.46
CD48P09326 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.93■□□□□ 0.46
CD48P09326 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CD48P09326 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CD48P09326 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CD48P09326 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CD48P09326 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.92■□□□□ 0.46
CD48P09326 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CD48P09326 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CD48P09326 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CD48P09326 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CD48P09326 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.92■□□□□ 0.46
CD48P09326 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.92■□□□□ 0.46
CD48P09326 AL020989.1-201ENST00000422979 469 ntBASIC17.92■□□□□ 0.46
CD48P09326 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.92■□□□□ 0.46
CD48P09326 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.92■□□□□ 0.46
CD48P09326 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.92■□□□□ 0.46
CD48P09326 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.92■□□□□ 0.46
CD48P09326 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.92■□□□□ 0.46
CD48P09326 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CD48P09326 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CD48P09326 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.92■□□□□ 0.46
CD48P09326 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CD48P09326 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD48P09326 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.91■□□□□ 0.46
CD48P09326 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CD48P09326 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.91■□□□□ 0.46
CD48P09326 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CD48P09326 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.91■□□□□ 0.46
CD48P09326 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.91■□□□□ 0.46
CD48P09326 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.91■□□□□ 0.46
CD48P09326 KRT16P4-201ENST00000453883 522 ntBASIC17.91■□□□□ 0.46
CD48P09326 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.91■□□□□ 0.46
CD48P09326 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.91■□□□□ 0.46
CD48P09326 MIR3652-201ENST00000579335 131 ntBASIC17.91■□□□□ 0.46
CD48P09326 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.91■□□□□ 0.46
CD48P09326 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.91■□□□□ 0.46
CD48P09326 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CD48P09326 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.91■□□□□ 0.46
CD48P09326 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CD48P09326 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.91■□□□□ 0.46
CD48P09326 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD48P09326 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CD48P09326 AC079776.2-201ENST00000641154 1609 ntBASIC17.9■□□□□ 0.46
CD48P09326 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD48P09326 AP005117.1-201ENST00000584346 1413 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms