Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.38■□□□□ 0.37
MMP2P08253 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
MMP2P08253 AC012640.2-201ENST00000561606 901 ntBASIC17.38■□□□□ 0.37
MMP2P08253 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MMP2P08253 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
MMP2P08253 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MMP2P08253 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP2P08253 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP2P08253 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP2P08253 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP2P08253 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP2P08253 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP2P08253 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP2P08253 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
MMP2P08253 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP2P08253 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP2P08253 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 AC092068.3-201ENST00000587894 2016 ntBASIC17.37■□□□□ 0.37
MMP2P08253 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP2P08253 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
MMP2P08253 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP2P08253 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP2P08253 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
MMP2P08253 ELK2BP-201ENST00000415014 1224 ntBASIC17.37■□□□□ 0.37
MMP2P08253 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.37■□□□□ 0.37
MMP2P08253 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
MMP2P08253 RNA5SP419-201ENST00000515908 135 ntBASIC17.37■□□□□ 0.37
MMP2P08253 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.37■□□□□ 0.37
MMP2P08253 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.37■□□□□ 0.37
MMP2P08253 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP2P08253 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.37■□□□□ 0.37
MMP2P08253 AL121894.2-201ENST00000602977 491 ntBASIC17.37■□□□□ 0.37
MMP2P08253 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.37■□□□□ 0.37
MMP2P08253 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP2P08253 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MMP2P08253 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP2P08253 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP2P08253 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MMP2P08253 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MMP2P08253 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MMP2P08253 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MMP2P08253 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.36■□□□□ 0.37
MMP2P08253 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.36■□□□□ 0.37
MMP2P08253 AP002414.1-201ENST00000391405 1147 ntBASIC17.36■□□□□ 0.37
MMP2P08253 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP2P08253 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.36■□□□□ 0.37
MMP2P08253 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP2P08253 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 AC009078.2-202ENST00000463353 338 ntBASIC17.36■□□□□ 0.37
MMP2P08253 AF186996.4-201ENST00000467186 377 ntBASIC17.36■□□□□ 0.37
MMP2P08253 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
MMP2P08253 DUX4L17-201ENST00000557360 1267 ntBASIC17.36■□□□□ 0.37
MMP2P08253 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.36■□□□□ 0.37
MMP2P08253 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP2P08253 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
MMP2P08253 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP2P08253 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MMP2P08253 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MMP2P08253 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 HCG11-201ENST00000411553 5696 ntBASIC17.36■□□□□ 0.37
MMP2P08253 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP2P08253 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP2P08253 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
MMP2P08253 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MMP2P08253 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.35■□□□□ 0.37
MMP2P08253 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP2P08253 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms