Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RETP07949 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RETP07949 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.44■□□□□ 0.38
RETP07949 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RETP07949 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RETP07949 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.44■□□□□ 0.38
RETP07949 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RETP07949 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
RETP07949 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.43■□□□□ 0.38
RETP07949 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RETP07949 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RETP07949 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RETP07949 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RETP07949 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.43■□□□□ 0.38
RETP07949 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RETP07949 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RETP07949 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RETP07949 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RETP07949 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RETP07949 AC015922.1-201ENST00000421102 1152 ntBASIC17.43■□□□□ 0.38
RETP07949 DDX43P3-201ENST00000441064 443 ntBASIC17.43■□□□□ 0.38
RETP07949 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RETP07949 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.43■□□□□ 0.38
RETP07949 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RETP07949 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
RETP07949 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.43■□□□□ 0.38
RETP07949 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.43■□□□□ 0.38
RETP07949 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.43■□□□□ 0.38
RETP07949 AC091812.2-201ENST00000619081 385 ntBASIC17.43■□□□□ 0.38
RETP07949 AC007064.4-201ENST00000637740 555 ntBASIC17.43■□□□□ 0.38
RETP07949 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.43■□□□□ 0.38
RETP07949 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.43■□□□□ 0.38
RETP07949 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RETP07949 AC090340.1-201ENST00000620778 4980 ntBASIC17.43■□□□□ 0.38
RETP07949 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
RETP07949 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RETP07949 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RETP07949 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.43■□□□□ 0.38
RETP07949 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.43■□□□□ 0.38
RETP07949 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RETP07949 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.43■□□□□ 0.38
RETP07949 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.43■□□□□ 0.38
RETP07949 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.42■□□□□ 0.38
RETP07949 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RETP07949 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.42■□□□□ 0.38
RETP07949 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.42■□□□□ 0.38
RETP07949 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 AC025580.3-201ENST00000617932 1424 ntBASIC17.42■□□□□ 0.38
RETP07949 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 GK-202ENST00000378941 458 ntTSL 3 BASIC17.42■□□□□ 0.38
RETP07949 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.42■□□□□ 0.38
RETP07949 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
RETP07949 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.42■□□□□ 0.38
RETP07949 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.42■□□□□ 0.38
RETP07949 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RETP07949 LINC00628-201ENST00000628516 1289 ntBASIC17.42■□□□□ 0.38
RETP07949 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RETP07949 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.42■□□□□ 0.38
RETP07949 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.42■□□□□ 0.38
RETP07949 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.42■□□□□ 0.38
RETP07949 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RETP07949 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RETP07949 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.42■□□□□ 0.38
RETP07949 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RETP07949 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RETP07949 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.41■□□□□ 0.38
RETP07949 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.41■□□□□ 0.38
RETP07949 AC010460.3-201ENST00000511359 1579 ntBASIC17.41■□□□□ 0.38
RETP07949 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.41■□□□□ 0.38
RETP07949 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.41■□□□□ 0.38
RETP07949 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.41■□□□□ 0.38
RETP07949 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RETP07949 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RETP07949 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.41■□□□□ 0.38
RETP07949 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.41■□□□□ 0.38
RETP07949 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.41■□□□□ 0.38
RETP07949 AC023141.5-201ENST00000458585 616 ntBASIC17.41■□□□□ 0.38
RETP07949 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.41■□□□□ 0.38
RETP07949 AC109322.1-201ENST00000524499 1264 ntBASIC17.41■□□□□ 0.38
RETP07949 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.41■□□□□ 0.38
RETP07949 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms