Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.08■□□□□ 0.32
CAPN1P07384 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPN1P07384 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPN1P07384 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPN1P07384 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPN1P07384 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPN1P07384 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CAPN1P07384 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPN1P07384 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPN1P07384 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPN1P07384 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.07■□□□□ 0.32
CAPN1P07384 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPN1P07384 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CAPN1P07384 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPN1P07384 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CAPN1P07384 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CAPN1P07384 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPN1P07384 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CAPN1P07384 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPN1P07384 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPN1P07384 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPN1P07384 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CAPN1P07384 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPN1P07384 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPN1P07384 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CAPN1P07384 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CAPN1P07384 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.06■□□□□ 0.32
CAPN1P07384 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.06■□□□□ 0.32
CAPN1P07384 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 NUS1P2-201ENST00000417358 873 ntBASIC17.06■□□□□ 0.32
CAPN1P07384 POM121L3P-201ENST00000419331 1163 ntBASIC17.06■□□□□ 0.32
CAPN1P07384 AC096633.1-201ENST00000422446 749 ntBASIC17.06■□□□□ 0.32
CAPN1P07384 MINOS1P3-201ENST00000457048 203 ntBASIC17.06■□□□□ 0.32
CAPN1P07384 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPN1P07384 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPN1P07384 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPN1P07384 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPN1P07384 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPN1P07384 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CAPN1P07384 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CAPN1P07384 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CAPN1P07384 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CAPN1P07384 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN1P07384 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.05■□□□□ 0.32
CAPN1P07384 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CAPN1P07384 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CAPN1P07384 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 AC099398.1-201ENST00000567919 2776 ntBASIC17.05■□□□□ 0.32
CAPN1P07384 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPN1P07384 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN1P07384 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPN1P07384 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.05■□□□□ 0.32
CAPN1P07384 AP002469.2-201ENST00000531724 424 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms