Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.12■□□□□ 0.97
CSF1RP07333 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CSF1RP07333 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSF1RP07333 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSF1RP07333 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.12■□□□□ 0.97
CSF1RP07333 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1RP07333 AC067852.2-201ENST00000590513 2313 ntBASIC21.11■□□□□ 0.97
CSF1RP07333 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1RP07333 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1RP07333 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CSF1RP07333 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1RP07333 FRMD8P1-201ENST00000440433 1524 ntBASIC21.11■□□□□ 0.97
CSF1RP07333 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CSF1RP07333 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CSF1RP07333 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1RP07333 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1RP07333 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1RP07333 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1RP07333 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.11■□□□□ 0.97
CSF1RP07333 AP000344.2-201ENST00000512987 629 ntBASIC21.11■□□□□ 0.97
CSF1RP07333 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CSF1RP07333 AC112191.1-201ENST00000523689 701 ntBASIC21.11■□□□□ 0.97
CSF1RP07333 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.11■□□□□ 0.97
CSF1RP07333 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CSF1RP07333 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.11■□□□□ 0.97
CSF1RP07333 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.11■□□□□ 0.97
CSF1RP07333 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1RP07333 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1RP07333 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CSF1RP07333 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSF1RP07333 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.1■□□□□ 0.97
CSF1RP07333 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.1■□□□□ 0.97
CSF1RP07333 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.1■□□□□ 0.97
CSF1RP07333 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CSF1RP07333 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CSF1RP07333 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.1■□□□□ 0.97
CSF1RP07333 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CSF1RP07333 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 AC002056.1-201ENST00000395613 760 ntBASIC21.1■□□□□ 0.97
CSF1RP07333 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CSF1RP07333 AC004461.1-201ENST00000412461 403 ntBASIC21.1■□□□□ 0.97
CSF1RP07333 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.1■□□□□ 0.97
CSF1RP07333 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.1■□□□□ 0.97
CSF1RP07333 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.1■□□□□ 0.97
CSF1RP07333 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CSF1RP07333 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSF1RP07333 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CSF1RP07333 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CSF1RP07333 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CSF1RP07333 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.09■□□□□ 0.97
CSF1RP07333 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CSF1RP07333 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1RP07333 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1RP07333 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CSF1RP07333 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1RP07333 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CSF1RP07333 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.09■□□□□ 0.97
CSF1RP07333 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1RP07333 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1RP07333 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1RP07333 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CSF1RP07333 AC027796.2-201ENST00000575326 344 ntBASIC21.09■□□□□ 0.97
CSF1RP07333 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.09■□□□□ 0.97
CSF1RP07333 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.09■□□□□ 0.97
CSF1RP07333 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CSF1RP07333 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1RP07333 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.09■□□□□ 0.97
CSF1RP07333 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.09■□□□□ 0.97
CSF1RP07333 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1RP07333 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CSF1RP07333 TOP3BP1-201ENST00000420768 1380 ntBASIC21.09■□□□□ 0.97
CSF1RP07333 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1RP07333 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSF1RP07333 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1RP07333 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1RP07333 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1RP07333 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1RP07333 AL353732.1-201ENST00000569618 1459 ntBASIC21.08■□□□□ 0.97
CSF1RP07333 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.08■□□□□ 0.97
CSF1RP07333 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1RP07333 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1RP07333 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1RP07333 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1RP07333 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CSF1RP07333 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CSF1RP07333 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSF1RP07333 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.08■□□□□ 0.97
CSF1RP07333 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CSF1RP07333 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.08■□□□□ 0.97
CSF1RP07333 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms