Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR3DP05423 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR3DP05423 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR3DP05423 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR3DP05423 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR3DP05423 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR3DP05423 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
POLR3DP05423 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR3DP05423 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR3DP05423 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR3DP05423 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR3DP05423 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR3DP05423 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR3DP05423 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.68■□□□□ 0.9
POLR3DP05423 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR3DP05423 AC007967.2-201ENST00000432613 625 ntBASIC20.68■□□□□ 0.9
POLR3DP05423 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR3DP05423 AL591424.1-201ENST00000442569 1213 ntBASIC20.68■□□□□ 0.9
POLR3DP05423 KRT18P3-201ENST00000451602 1288 ntBASIC20.68■□□□□ 0.9
POLR3DP05423 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.68■□□□□ 0.9
POLR3DP05423 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR3DP05423 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR3DP05423 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
POLR3DP05423 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR3DP05423 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR3DP05423 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
POLR3DP05423 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
POLR3DP05423 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR3DP05423 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR3DP05423 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR3DP05423 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR3DP05423 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
POLR3DP05423 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
POLR3DP05423 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR3DP05423 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR3DP05423 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR3DP05423 PP12613-201ENST00000424958 2230 ntBASIC20.67■□□□□ 0.9
POLR3DP05423 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
POLR3DP05423 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR3DP05423 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR3DP05423 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR3DP05423 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR3DP05423 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR3DP05423 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR3DP05423 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR3DP05423 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR3DP05423 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
POLR3DP05423 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR3DP05423 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.66■□□□□ 0.9
POLR3DP05423 RPS15P9-201ENST00000494093 319 ntBASIC20.66■□□□□ 0.9
POLR3DP05423 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 AC092865.5-201ENST00000545435 363 ntBASIC20.66■□□□□ 0.9
POLR3DP05423 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR3DP05423 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR3DP05423 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR3DP05423 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR3DP05423 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLR3DP05423 AC046185.3-201ENST00000623228 1824 ntBASIC20.66■□□□□ 0.9
POLR3DP05423 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR3DP05423 AL355312.1-201ENST00000407115 2176 ntBASIC20.66■□□□□ 0.9
POLR3DP05423 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR3DP05423 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLR3DP05423 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
POLR3DP05423 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR3DP05423 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR3DP05423 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR3DP05423 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
POLR3DP05423 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
POLR3DP05423 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR3DP05423 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
POLR3DP05423 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms