Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-ND3P03897 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MT-ND3P03897 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-ND3P03897 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-ND3P03897 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-ND3P03897 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
MT-ND3P03897 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
MT-ND3P03897 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-ND3P03897 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.66■□□□□ 0.42
MT-ND3P03897 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-ND3P03897 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.66■□□□□ 0.42
MT-ND3P03897 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.66■□□□□ 0.42
MT-ND3P03897 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.66■□□□□ 0.42
MT-ND3P03897 CLEC4GP1-201ENST00000596555 870 ntBASIC17.66■□□□□ 0.42
MT-ND3P03897 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.66■□□□□ 0.42
MT-ND3P03897 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.66■□□□□ 0.42
MT-ND3P03897 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.66■□□□□ 0.42
MT-ND3P03897 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.66■□□□□ 0.42
MT-ND3P03897 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MT-ND3P03897 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MT-ND3P03897 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
MT-ND3P03897 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MT-ND3P03897 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
MT-ND3P03897 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.66■□□□□ 0.42
MT-ND3P03897 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.65■□□□□ 0.42
MT-ND3P03897 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MT-ND3P03897 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 AC116353.5-201ENST00000638148 1699 ntBASIC17.65■□□□□ 0.42
MT-ND3P03897 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.65■□□□□ 0.42
MT-ND3P03897 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.65■□□□□ 0.42
MT-ND3P03897 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.65■□□□□ 0.42
MT-ND3P03897 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MT-ND3P03897 AC005104.2-201ENST00000427818 678 ntBASIC17.65■□□□□ 0.42
MT-ND3P03897 DUSP5P1-201ENST00000441325 1139 ntBASIC17.65■□□□□ 0.42
MT-ND3P03897 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.65■□□□□ 0.42
MT-ND3P03897 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.65■□□□□ 0.42
MT-ND3P03897 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.65■□□□□ 0.42
MT-ND3P03897 AC024563.2-201ENST00000603282 481 ntBASIC17.65■□□□□ 0.42
MT-ND3P03897 AL136038.4-201ENST00000603606 1261 ntBASIC17.65■□□□□ 0.42
MT-ND3P03897 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.65■□□□□ 0.42
MT-ND3P03897 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MT-ND3P03897 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.65■□□□□ 0.42
MT-ND3P03897 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.65■□□□□ 0.42
MT-ND3P03897 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MT-ND3P03897 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MT-ND3P03897 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MT-ND3P03897 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MT-ND3P03897 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MT-ND3P03897 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MT-ND3P03897 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MT-ND3P03897 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MT-ND3P03897 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.64■□□□□ 0.41
MT-ND3P03897 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MT-ND3P03897 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MT-ND3P03897 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
MT-ND3P03897 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms