Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT6AP02538 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT6AP02538 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT6AP02538 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KRT6AP02538 KRT8P10-201ENST00000450021 1447 ntBASIC16.79■□□□□ 0.28
KRT6AP02538 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 AC005332.1-201ENST00000577698 1310 ntBASIC16.79■□□□□ 0.28
KRT6AP02538 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT6AP02538 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT6AP02538 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT6AP02538 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT6AP02538 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KRT6AP02538 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT6AP02538 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT6AP02538 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT6AP02538 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.79■□□□□ 0.28
KRT6AP02538 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT6AP02538 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT6AP02538 STK25P1-201ENST00000585406 838 ntBASIC16.79■□□□□ 0.28
KRT6AP02538 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT6AP02538 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
KRT6AP02538 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT6AP02538 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT6AP02538 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT6AP02538 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT6AP02538 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT6AP02538 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
KRT6AP02538 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
KRT6AP02538 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT6AP02538 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
KRT6AP02538 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
KRT6AP02538 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT6AP02538 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
KRT6AP02538 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
KRT6AP02538 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT6AP02538 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.78■□□□□ 0.28
KRT6AP02538 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT6AP02538 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT6AP02538 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT6AP02538 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT6AP02538 AC060834.1-201ENST00000443027 2032 ntBASIC16.78■□□□□ 0.28
KRT6AP02538 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT6AP02538 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
KRT6AP02538 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT6AP02538 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT6AP02538 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT6AP02538 AC011676.5-201ENST00000624864 2660 ntBASIC16.78■□□□□ 0.28
KRT6AP02538 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT6AP02538 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.77■□□□□ 0.28
KRT6AP02538 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 AC016734.2-201ENST00000624325 1377 ntBASIC16.77■□□□□ 0.28
KRT6AP02538 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.77■□□□□ 0.28
KRT6AP02538 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
KRT6AP02538 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.77■□□□□ 0.28
KRT6AP02538 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KRT6AP02538 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
KRT6AP02538 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms