Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
COL1A1P02452 AL355306.1-201ENST00000415580 579 ntBASIC20.63■□□□□ 0.89
COL1A1P02452 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.63■□□□□ 0.89
COL1A1P02452 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.63■□□□□ 0.89
COL1A1P02452 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.63■□□□□ 0.89
COL1A1P02452 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.63■□□□□ 0.89
COL1A1P02452 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.63■□□□□ 0.89
COL1A1P02452 AC015911.4-201ENST00000588022 1070 ntBASIC20.63■□□□□ 0.89
COL1A1P02452 AC009093.7-201ENST00000623853 1223 ntBASIC20.63■□□□□ 0.89
COL1A1P02452 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 AL121761.2-201ENST00000598007 1648 ntBASIC20.63■□□□□ 0.89
COL1A1P02452 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 AC093525.9-201ENST00000624961 1746 ntBASIC20.63■□□□□ 0.89
COL1A1P02452 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.63■□□□□ 0.89
COL1A1P02452 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
COL1A1P02452 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.63■□□□□ 0.89
COL1A1P02452 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.63■□□□□ 0.89
COL1A1P02452 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.63■□□□□ 0.89
COL1A1P02452 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.63■□□□□ 0.89
COL1A1P02452 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.63■□□□□ 0.89
COL1A1P02452 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL1A1P02452 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A1P02452 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A1P02452 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A1P02452 AC140658.5-201ENST00000438532 169 ntBASIC20.62■□□□□ 0.89
COL1A1P02452 COX20P2-201ENST00000452636 358 ntBASIC20.62■□□□□ 0.89
COL1A1P02452 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.62■□□□□ 0.89
COL1A1P02452 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.62■□□□□ 0.89
COL1A1P02452 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.62■□□□□ 0.89
COL1A1P02452 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.62■□□□□ 0.89
COL1A1P02452 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.62■□□□□ 0.89
COL1A1P02452 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
COL1A1P02452 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.62■□□□□ 0.89
COL1A1P02452 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.62■□□□□ 0.89
COL1A1P02452 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A1P02452 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.62■□□□□ 0.89
COL1A1P02452 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A1P02452 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A1P02452 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A1P02452 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
COL1A1P02452 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
COL1A1P02452 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A1P02452 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL1A1P02452 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.62■□□□□ 0.89
COL1A1P02452 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.62■□□□□ 0.89
COL1A1P02452 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.62■□□□□ 0.89
COL1A1P02452 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
COL1A1P02452 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.62■□□□□ 0.89
COL1A1P02452 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.62■□□□□ 0.89
COL1A1P02452 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.62■□□□□ 0.89
COL1A1P02452 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.61■□□□□ 0.89
COL1A1P02452 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.61■□□□□ 0.89
COL1A1P02452 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 AC112191.1-201ENST00000523689 701 ntBASIC20.61■□□□□ 0.89
COL1A1P02452 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
COL1A1P02452 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
COL1A1P02452 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.61■□□□□ 0.89
COL1A1P02452 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL1A1P02452 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.61■□□□□ 0.89
COL1A1P02452 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.61■□□□□ 0.89
COL1A1P02452 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.61■□□□□ 0.89
COL1A1P02452 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL1A1P02452 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.6■□□□□ 0.89
COL1A1P02452 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
COL1A1P02452 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A1P02452 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A1P02452 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A1P02452 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
COL1A1P02452 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A1P02452 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.6■□□□□ 0.89
COL1A1P02452 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.6■□□□□ 0.89
COL1A1P02452 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
COL1A1P02452 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A1P02452 AL133373.2-201ENST00000623187 2828 ntBASIC20.6■□□□□ 0.89
COL1A1P02452 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL1A1P02452 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.6■□□□□ 0.89
COL1A1P02452 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms