Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.63□□□□□ -0.07
PDCD6O75340 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 AC063952.2-201ENST00000498792 1227 ntBASIC14.63□□□□□ -0.07
PDCD6O75340 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.63□□□□□ -0.07
PDCD6O75340 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.63□□□□□ -0.07
PDCD6O75340 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.63□□□□□ -0.07
PDCD6O75340 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.63□□□□□ -0.07
PDCD6O75340 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.63□□□□□ -0.07
PDCD6O75340 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.63□□□□□ -0.07
PDCD6O75340 AC124864.1-201ENST00000623408 392 ntBASIC14.63□□□□□ -0.07
PDCD6O75340 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PDCD6O75340 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 EGFEM1P-202ENST00000431685 1563 ntBASIC14.63□□□□□ -0.07
PDCD6O75340 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.63□□□□□ -0.07
PDCD6O75340 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDCD6O75340 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.63□□□□□ -0.07
PDCD6O75340 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.63□□□□□ -0.07
PDCD6O75340 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.63□□□□□ -0.07
PDCD6O75340 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDCD6O75340 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PDCD6O75340 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
PDCD6O75340 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
PDCD6O75340 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PDCD6O75340 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PDCD6O75340 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
PDCD6O75340 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PDCD6O75340 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.62□□□□□ -0.07
PDCD6O75340 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PDCD6O75340 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
PDCD6O75340 AL671277.2-201ENST00000458060 996 ntBASIC14.62□□□□□ -0.07
PDCD6O75340 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.62□□□□□ -0.07
PDCD6O75340 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.62□□□□□ -0.07
PDCD6O75340 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 AC011840.4-201ENST00000578471 627 ntBASIC14.62□□□□□ -0.07
PDCD6O75340 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.62□□□□□ -0.07
PDCD6O75340 AC090616.6-201ENST00000582640 721 ntBASIC14.62□□□□□ -0.07
PDCD6O75340 STK25P1-201ENST00000585406 838 ntBASIC14.62□□□□□ -0.07
PDCD6O75340 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.62□□□□□ -0.07
PDCD6O75340 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
PDCD6O75340 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
PDCD6O75340 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PDCD6O75340 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.62□□□□□ -0.07
PDCD6O75340 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PDCD6O75340 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.61□□□□□ -0.07
PDCD6O75340 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.61□□□□□ -0.07
PDCD6O75340 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.61□□□□□ -0.07
PDCD6O75340 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.61□□□□□ -0.07
PDCD6O75340 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.61□□□□□ -0.07
PDCD6O75340 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 KRT8P10-201ENST00000450021 1447 ntBASIC14.61□□□□□ -0.07
PDCD6O75340 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.61□□□□□ -0.07
PDCD6O75340 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.61□□□□□ -0.07
PDCD6O75340 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.61□□□□□ -0.07
PDCD6O75340 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.61□□□□□ -0.07
PDCD6O75340 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDCD6O75340 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.61□□□□□ -0.07
PDCD6O75340 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
PDCD6O75340 LINC01238-205ENST00000567549 1107 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms