Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
PFDN1O60925 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PFDN1O60925 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PFDN1O60925 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.45■□□□□ 0.06
PFDN1O60925 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.45■□□□□ 0.06
PFDN1O60925 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.45■□□□□ 0.06
PFDN1O60925 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.45■□□□□ 0.06
PFDN1O60925 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PFDN1O60925 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.45■□□□□ 0.06
PFDN1O60925 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.44■□□□□ 0.06
PFDN1O60925 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.44■□□□□ 0.06
PFDN1O60925 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.44■□□□□ 0.06
PFDN1O60925 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PFDN1O60925 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.44■□□□□ 0.06
PFDN1O60925 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.44■□□□□ 0.06
PFDN1O60925 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PFDN1O60925 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PFDN1O60925 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
PFDN1O60925 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.44■□□□□ 0.06
PFDN1O60925 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
PFDN1O60925 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.44■□□□□ 0.06
PFDN1O60925 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PFDN1O60925 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PFDN1O60925 AP003680.1-201ENST00000598970 3660 ntBASIC15.44■□□□□ 0.06
PFDN1O60925 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.43■□□□□ 0.06
PFDN1O60925 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.43■□□□□ 0.06
PFDN1O60925 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PFDN1O60925 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.43■□□□□ 0.06
PFDN1O60925 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.43■□□□□ 0.06
PFDN1O60925 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 AL731571.1-201ENST00000617058 5428 ntBASIC15.43■□□□□ 0.06
PFDN1O60925 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.43■□□□□ 0.06
PFDN1O60925 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.43■□□□□ 0.06
PFDN1O60925 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.43■□□□□ 0.06
PFDN1O60925 SLC7A5P2-201ENST00000553010 536 ntBASIC15.43■□□□□ 0.06
PFDN1O60925 AC243732.1-201ENST00000612648 864 ntBASIC15.43■□□□□ 0.06
PFDN1O60925 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.43■□□□□ 0.06
PFDN1O60925 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.43■□□□□ 0.06
PFDN1O60925 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PFDN1O60925 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms