Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTN4O43707 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.42■□□□□ 0.7
ACTN4O43707 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTN4O43707 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTN4O43707 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ACTN4O43707 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ACTN4O43707 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.42■□□□□ 0.7
ACTN4O43707 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ACTN4O43707 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACTN4O43707 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTN4O43707 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTN4O43707 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.41■□□□□ 0.7
ACTN4O43707 PKD1P1-201ENST00000458669 6805 ntBASIC19.41■□□□□ 0.7
ACTN4O43707 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.41■□□□□ 0.7
ACTN4O43707 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTN4O43707 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ACTN4O43707 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTN4O43707 AL118508.1-201ENST00000613502 2345 ntBASIC19.41■□□□□ 0.7
ACTN4O43707 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ACTN4O43707 AC148477.5-201ENST00000625164 1645 ntBASIC19.41■□□□□ 0.7
ACTN4O43707 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTN4O43707 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTN4O43707 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACTN4O43707 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ACTN4O43707 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTN4O43707 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTN4O43707 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACTN4O43707 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTN4O43707 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTN4O43707 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.41■□□□□ 0.7
ACTN4O43707 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTN4O43707 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTN4O43707 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.41■□□□□ 0.7
ACTN4O43707 AL358472.4-201ENST00000633140 710 ntBASIC19.41■□□□□ 0.7
ACTN4O43707 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ACTN4O43707 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ACTN4O43707 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ACTN4O43707 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.41■□□□□ 0.7
ACTN4O43707 AC078925.2-201ENST00000624013 1973 ntBASIC19.41■□□□□ 0.7
ACTN4O43707 FRMD8P1-201ENST00000440433 1524 ntBASIC19.41■□□□□ 0.7
ACTN4O43707 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ACTN4O43707 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.4■□□□□ 0.7
ACTN4O43707 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.4■□□□□ 0.7
ACTN4O43707 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTN4O43707 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTN4O43707 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.4■□□□□ 0.7
ACTN4O43707 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.4■□□□□ 0.7
ACTN4O43707 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACTN4O43707 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
ACTN4O43707 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ACTN4O43707 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTN4O43707 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.4■□□□□ 0.7
ACTN4O43707 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTN4O43707 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACTN4O43707 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
ACTN4O43707 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.4■□□□□ 0.7
ACTN4O43707 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.4■□□□□ 0.7
ACTN4O43707 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ACTN4O43707 AC114341.1-201ENST00000618070 349 ntBASIC19.4■□□□□ 0.7
ACTN4O43707 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTN4O43707 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.4■□□□□ 0.7
ACTN4O43707 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.4■□□□□ 0.7
ACTN4O43707 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTN4O43707 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.4■□□□□ 0.7
ACTN4O43707 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTN4O43707 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
ACTN4O43707 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
ACTN4O43707 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ACTN4O43707 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
ACTN4O43707 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ACTN4O43707 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ACTN4O43707 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ACTN4O43707 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ACTN4O43707 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
ACTN4O43707 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ACTN4O43707 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.39■□□□□ 0.69
ACTN4O43707 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ACTN4O43707 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.39■□□□□ 0.69
ACTN4O43707 AC074051.2-201ENST00000565115 352 ntBASIC19.39■□□□□ 0.69
ACTN4O43707 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.39■□□□□ 0.69
ACTN4O43707 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.39■□□□□ 0.69
ACTN4O43707 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.39■□□□□ 0.69
ACTN4O43707 AP000867.4-201ENST00000641616 219 ntBASIC19.39■□□□□ 0.69
ACTN4O43707 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ACTN4O43707 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACTN4O43707 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ACTN4O43707 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms