Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF13O43567 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF13O43567 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF13O43567 AGGF1P2-201ENST00000426656 2106 ntBASIC15.79■□□□□ 0.12
RNF13O43567 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF13O43567 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF13O43567 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.78■□□□□ 0.12
RNF13O43567 AC125634.1-201ENST00000438758 1403 ntBASIC15.78■□□□□ 0.12
RNF13O43567 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 PCDHB19P-201ENST00000570871 2371 ntBASIC15.78■□□□□ 0.12
RNF13O43567 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RNF13O43567 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF13O43567 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
RNF13O43567 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RNF13O43567 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RNF13O43567 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 PCED1CP-201ENST00000419887 785 ntBASIC15.78■□□□□ 0.12
RNF13O43567 AC002558.1-201ENST00000488906 803 ntBASIC15.78■□□□□ 0.12
RNF13O43567 IGHV3-52-201ENST00000519770 353 ntBASIC15.78■□□□□ 0.12
RNF13O43567 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF13O43567 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF13O43567 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RNF13O43567 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RNF13O43567 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RNF13O43567 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF13O43567 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF13O43567 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF13O43567 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF13O43567 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF13O43567 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF13O43567 AC105020.1-201ENST00000435356 2205 ntBASIC15.78■□□□□ 0.12
RNF13O43567 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF13O43567 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF13O43567 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF13O43567 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF13O43567 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF13O43567 AC016734.2-201ENST00000624325 1377 ntBASIC15.77■□□□□ 0.12
RNF13O43567 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.77■□□□□ 0.12
RNF13O43567 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 KRT18P1-202ENST00000452408 1331 ntBASIC15.77■□□□□ 0.12
RNF13O43567 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF13O43567 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RNF13O43567 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.77■□□□□ 0.12
RNF13O43567 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF13O43567 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF13O43567 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF13O43567 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF13O43567 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF13O43567 AL353801.3-201ENST00000609898 542 ntBASIC15.77■□□□□ 0.12
RNF13O43567 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF13O43567 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF13O43567 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RNF13O43567 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF13O43567 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF13O43567 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.77■□□□□ 0.11
RNF13O43567 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF13O43567 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
RNF13O43567 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF13O43567 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF13O43567 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF13O43567 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF13O43567 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RNF13O43567 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF13O43567 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF13O43567 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RNF13O43567 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF13O43567 IER3-202ENST00000376377 1350 ntBASIC15.76■□□□□ 0.11
RNF13O43567 FER1L4-210ENST00000615531 5998 ntBASIC15.76■□□□□ 0.11
RNF13O43567 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms