Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CASQ2O14958 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.47■□□□□ 0.23
CASQ2O14958 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CASQ2O14958 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CASQ2O14958 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CASQ2O14958 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.47■□□□□ 0.23
CASQ2O14958 KRT16P5-201ENST00000455284 522 ntBASIC16.47■□□□□ 0.23
CASQ2O14958 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.47■□□□□ 0.23
CASQ2O14958 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CASQ2O14958 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.47■□□□□ 0.23
CASQ2O14958 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.47■□□□□ 0.23
CASQ2O14958 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.47■□□□□ 0.23
CASQ2O14958 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.47■□□□□ 0.23
CASQ2O14958 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASQ2O14958 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.47■□□□□ 0.23
CASQ2O14958 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CASQ2O14958 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.47■□□□□ 0.23
CASQ2O14958 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CASQ2O14958 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.46■□□□□ 0.23
CASQ2O14958 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CASQ2O14958 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.46■□□□□ 0.23
CASQ2O14958 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CASQ2O14958 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.46■□□□□ 0.23
CASQ2O14958 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.46■□□□□ 0.23
CASQ2O14958 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.46■□□□□ 0.23
CASQ2O14958 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CASQ2O14958 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.46■□□□□ 0.23
CASQ2O14958 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.46■□□□□ 0.23
CASQ2O14958 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CASQ2O14958 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.46■□□□□ 0.23
CASQ2O14958 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.46■□□□□ 0.23
CASQ2O14958 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASQ2O14958 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CASQ2O14958 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CASQ2O14958 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CASQ2O14958 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CASQ2O14958 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CASQ2O14958 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.45■□□□□ 0.22
CASQ2O14958 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CASQ2O14958 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.45■□□□□ 0.22
CASQ2O14958 KRT18P23-201ENST00000435622 1283 ntBASIC16.45■□□□□ 0.22
CASQ2O14958 FAM207BP-201ENST00000447172 505 ntBASIC16.45■□□□□ 0.22
CASQ2O14958 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.45■□□□□ 0.22
CASQ2O14958 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.45■□□□□ 0.22
CASQ2O14958 MIR3180-4-201ENST00000582223 153 ntBASIC16.45■□□□□ 0.22
CASQ2O14958 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.45■□□□□ 0.22
CASQ2O14958 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.45■□□□□ 0.22
CASQ2O14958 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.45■□□□□ 0.22
CASQ2O14958 AC130371.2-201ENST00000619443 611 ntBASIC16.45■□□□□ 0.22
CASQ2O14958 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.45■□□□□ 0.22
CASQ2O14958 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.45■□□□□ 0.22
CASQ2O14958 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.45■□□□□ 0.22
CASQ2O14958 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CASQ2O14958 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms