Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC073508.3-201ENST00000619697 1419 ntBASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 TSPY26P-202ENST00000565928 3884 ntBASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 ZNF444P1-201ENST00000559497 298 ntBASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 FLJ38576-201ENST00000623820 2459 ntBASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF103-CHMP3A0A140T963 FLJ16779-201ENST00000612722 7638 ntBASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF103-CHMP3A0A140T963 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms