Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHA3Q9Y5H8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHA3Q9Y5H8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 FRMD8P1-201ENST00000440433 1524 ntBASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA3Q9Y5H8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 AC003669.1-201ENST00000334569 611 ntBASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 AL031133.1-201ENST00000406807 723 ntBASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 TMPOP1-202ENST00000424642 1267 ntBASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 CHCHD2P8-201ENST00000429873 447 ntBASIC18.07■□□□□ 0.48
PCDHA3Q9Y5H8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms