Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 AC132938.6-201ENST00000623828 1655 ntBASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 SLC25A6P5-201ENST00000435663 894 ntBASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 KRT18P3-201ENST00000451602 1288 ntBASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 AL022326.1-202ENST00000641533 845 ntBASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 PMPCAP1-201ENST00000508114 1576 ntBASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA3Q9Y5H0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 PRYP5-201ENST00000451909 266 ntBASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDHGA3Q9Y5H0 AC012317.2-201ENST00000623305 2251 ntBASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA3Q9Y5H0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms