Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 KRT8P9-201ENST00000558927 1449 ntBASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 LINC01311-201ENST00000565162 1445 ntBASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB1Q9Y5G3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 AC092171.3-201ENST00000610122 2651 ntBASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGB1Q9Y5G3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 AC116562.4-202ENST00000641738 218 ntBASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 LINC00167-201ENST00000530583 1419 ntBASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 AC092338.2-201ENST00000568827 1415 ntBASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB1Q9Y5G3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGB1Q9Y5G3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PCDHGB1Q9Y5G3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB1Q9Y5G3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB1Q9Y5G3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB1Q9Y5G3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGB1Q9Y5G3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB1Q9Y5G3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB1Q9Y5G3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCDHGB1Q9Y5G3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB1Q9Y5G3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB1Q9Y5G3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms