Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00588Q9Y4M8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LINC00588Q9Y4M8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 AC011270.2-201ENST00000624293 2550 ntBASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 MIR1233-2-201ENST00000408138 82 ntBASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 MIR1233-1-201ENST00000408722 82 ntBASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 AC023274.1-201ENST00000418278 595 ntBASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 KRT18P2-201ENST00000447938 1258 ntBASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC00588Q9Y4M8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms