Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 TIMM8BP1-201ENST00000452384 211 ntBASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 AC025678.2-201ENST00000562061 970 ntBASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 AC005412.3-201ENST00000580309 715 ntBASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 MIR3197-201ENST00000582241 73 ntBASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LEMD3Q9Y2U8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 KRT8P48-201ENST00000515599 1220 ntBASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 AC109322.1-201ENST00000524499 1264 ntBASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 AC093520.2-201ENST00000561830 333 ntBASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 LINC00628-201ENST00000628516 1289 ntBASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LEMD3Q9Y2U8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 HMGA1P7-201ENST00000406908 502 ntBASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 AL627223.1-201ENST00000416693 442 ntBASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 SPDYE11-202ENST00000450699 704 ntBASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 SPDYE9P-201ENST00000570642 692 ntBASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 SPDYE10P-202ENST00000612005 668 ntBASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 SPDYE8P-202ENST00000612377 668 ntBASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LEMD3Q9Y2U8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 AC009093.7-201ENST00000623853 1223 ntBASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.85■□□□□ 0.93
LEMD3Q9Y2U8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms