Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.98■□□□□ 0.47
AP4E1Q9UPM8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 BX005266.1-201ENST00000473402 457 ntBASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 MTDHP3-201ENST00000594186 672 ntBASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 AC004817.3-201ENST00000602957 2129 ntBASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 REXO1L6P-202ENST00000619970 1078 ntBASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 LINC02012-201ENST00000608206 1725 ntBASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
AP4E1Q9UPM8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 AKR1C7P-201ENST00000305623 895 ntBASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 LINC01711-201ENST00000598340 967 ntBASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 AC008608.2-201ENST00000606089 416 ntBASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 IFNL4P1-201ENST00000607083 540 ntBASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 AL355877.3-201ENST00000622820 899 ntBASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
AP4E1Q9UPM8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms