Protein–RNA interactions for Protein: Q9UPA5

BSN, Protein bassoon, humanhuman

Predictions only

Length 3,926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSNQ9UPA5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BSNQ9UPA5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
BSNQ9UPA5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
BSNQ9UPA5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
BSNQ9UPA5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
BSNQ9UPA5 AC112492.5-201ENST00000421897 457 ntBASIC15.42■□□□□ 0.06
BSNQ9UPA5 AC002558.1-201ENST00000488906 803 ntBASIC15.42■□□□□ 0.06
BSNQ9UPA5 SPDYE18-201ENST00000510091 1050 ntBASIC15.42■□□□□ 0.06
BSNQ9UPA5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.42■□□□□ 0.06
BSNQ9UPA5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.42■□□□□ 0.06
BSNQ9UPA5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.42■□□□□ 0.06
BSNQ9UPA5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BSNQ9UPA5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
BSNQ9UPA5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
BSNQ9UPA5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
BSNQ9UPA5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
BSNQ9UPA5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
BSNQ9UPA5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BSNQ9UPA5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BSNQ9UPA5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BSNQ9UPA5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 AC241585.1-201ENST00000433527 519 ntBASIC15.41■□□□□ 0.06
BSNQ9UPA5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BSNQ9UPA5 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.41■□□□□ 0.06
BSNQ9UPA5 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
BSNQ9UPA5 AL162274.1-201ENST00000617191 1098 ntBASIC15.41■□□□□ 0.06
BSNQ9UPA5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
BSNQ9UPA5 MIR4259-201ENST00000584466 101 ntBASIC15.4■□□□□ 0.06
BSNQ9UPA5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.4■□□□□ 0.06
BSNQ9UPA5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.4■□□□□ 0.06
BSNQ9UPA5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
BSNQ9UPA5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.4■□□□□ 0.06
BSNQ9UPA5 AL161645.1-201ENST00000622716 1255 ntBASIC15.4■□□□□ 0.06
BSNQ9UPA5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.4■□□□□ 0.06
BSNQ9UPA5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.4■□□□□ 0.06
BSNQ9UPA5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
BSNQ9UPA5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
BSNQ9UPA5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
BSNQ9UPA5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
BSNQ9UPA5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BSNQ9UPA5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BSNQ9UPA5 MYCLP1-201ENST00000372451 1075 ntBASIC15.39■□□□□ 0.05
BSNQ9UPA5 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
BSNQ9UPA5 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 AL513480.1-201ENST00000451731 511 ntBASIC15.39■□□□□ 0.05
BSNQ9UPA5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BSNQ9UPA5 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 AC132938.2-201ENST00000579188 680 ntBASIC15.39■□□□□ 0.05
BSNQ9UPA5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 MIR6787-201ENST00000616675 61 ntBASIC15.39■□□□□ 0.05
BSNQ9UPA5 AL591163.1-201ENST00000641757 987 ntBASIC15.39■□□□□ 0.05
BSNQ9UPA5 AL645728.2-201ENST00000641974 660 ntBASIC15.39■□□□□ 0.05
BSNQ9UPA5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BSNQ9UPA5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BSNQ9UPA5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BSNQ9UPA5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
BSNQ9UPA5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BSNQ9UPA5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
BSNQ9UPA5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
BSNQ9UPA5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
BSNQ9UPA5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms