Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.26■□□□□ 0.51
CDH9Q9ULB4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 AC007967.2-201ENST00000432613 625 ntBASIC18.26■□□□□ 0.51
CDH9Q9ULB4 PAWRP1-201ENST00000451083 565 ntBASIC18.26■□□□□ 0.51
CDH9Q9ULB4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 AC064836.3-201ENST00000607928 673 ntBASIC18.26■□□□□ 0.51
CDH9Q9ULB4 AC010654.1-201ENST00000615722 808 ntBASIC18.26■□□□□ 0.51
CDH9Q9ULB4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDH9Q9ULB4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 RNA5SP416-201ENST00000516838 111 ntBASIC18.25■□□□□ 0.51
CDH9Q9ULB4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH9Q9ULB4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH9Q9ULB4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 LINC00896-202ENST00000609602 2128 ntBASIC18.23■□□□□ 0.51
CDH9Q9ULB4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH9Q9ULB4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms