Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 AC091607.1-201ENST00000490318 1060 ntBASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 AC009533.2-201ENST00000543664 586 ntBASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 AL136038.3-201ENST00000561909 1096 ntBASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LIMA1Q9UHB6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 GPR89P-201ENST00000407924 1495 ntBASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 AC003669.1-201ENST00000334569 611 ntBASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 AC011467.2-201ENST00000598425 242 ntBASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 LINC01023-201ENST00000606054 436 ntBASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LIMA1Q9UHB6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 DOC2GP-204ENST00000639052 2548 ntBASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 DUX4L26-201ENST00000489078 1255 ntBASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIMA1Q9UHB6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LIMA1Q9UHB6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LIMA1Q9UHB6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LIMA1Q9UHB6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
LIMA1Q9UHB6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
LIMA1Q9UHB6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.89■□□□□ 0.61
LIMA1Q9UHB6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms