Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF3Q9NR81 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.34■□□□□ 0.53
ARHGEF3Q9NR81 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.34■□□□□ 0.53
ARHGEF3Q9NR81 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.33■□□□□ 0.53
ARHGEF3Q9NR81 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.33■□□□□ 0.53
ARHGEF3Q9NR81 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARHGEF3Q9NR81 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
ARHGEF3Q9NR81 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ARHGEF3Q9NR81 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ARHGEF3Q9NR81 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.33■□□□□ 0.53
ARHGEF3Q9NR81 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ARHGEF3Q9NR81 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.33■□□□□ 0.53
ARHGEF3Q9NR81 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARHGEF3Q9NR81 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 BX005266.1-201ENST00000473402 457 ntBASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 CYMP-203ENST00000474680 1263 ntBASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 SNHG9-202ENST00000564014 471 ntBASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 AC006557.2-201ENST00000592985 1240 ntBASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 AL022326.1-202ENST00000641533 845 ntBASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 AC022211.2-201ENST00000585075 2527 ntBASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 MYLKP1-201ENST00000509077 1580 ntBASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 NKILA-202ENST00000614771 2598 ntBASIC18.33■□□□□ 0.52
ARHGEF3Q9NR81 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 MCCD1P2-201ENST00000423228 335 ntBASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 AC108751.1-201ENST00000490852 363 ntBASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 AC112698.1-201ENST00000510299 916 ntBASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 RFPL4AP1-201ENST00000530883 850 ntBASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 AC005829.1-201ENST00000570002 483 ntBASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF3Q9NR81 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 AC018695.7-201ENST00000624587 2492 ntBASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 AC046158.3-201ENST00000624947 2558 ntBASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ARHGEF3Q9NR81 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms